| version 1.8, 2016/10/30 01:10:18 |
version 1.13, 2022/04/07 00:56:44 |
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| $OpenXM: OpenXM/src/R/r-packages/note.txt,v 1.7 2016/10/28 02:27:39 takayama Exp $ |
$OpenXM: OpenXM/src/R/r-packages/note.txt,v 1.12 2022/04/06 01:03:42 takayama Exp $ |
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| See also OpenXM/src/hgm/note.txt |
See also OpenXM/src/hgm/note.txt |
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* R package build, reference pages. |
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https://cran.r-project.org/bin/macosx/tools/ |
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* Example |
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Edit files in src/hgm |
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cd R/r-packages |
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make rsync |
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R CMD INSTALL hgm |
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Start R and library(hgm) |
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hgm.ncso3() |
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??hgm |
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?hgm.ncorthant |
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remove.packages('hgm') |
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| * C source codes. |
* C source codes. |
| C sources and headers should be developed and edited in the directory |
C sources and headers should be developed and edited in the directory |
| OpenXM/src/hgm in order to provide a standalone mode without R |
OpenXM/src/hgm in order to provide a standalone mode without R |
| Line 28 See also OpenXM/src/hgm/note.txt |
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| Line 43 See also OpenXM/src/hgm/note.txt |
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| R CMD INSTALL hgm |
R CMD INSTALL hgm |
| R |
R |
| library(hgm) |
library(hgm) |
| You can check hgm.so3nc by hand. |
You can check hgm.ncso3 by hand. |
| R CMD REMOVE hgm |
R CMD REMOVE hgm |
| It is used to remove the test library. |
It is used to remove the test library. |
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| Line 39 See also OpenXM/src/hgm/note.txt |
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| Line 54 See also OpenXM/src/hgm/note.txt |
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| or |
or |
| R CMD build --binary hgm (perhaps, obsolete style) |
R CMD build --binary hgm (perhaps, obsolete style) |
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(5) make copy-web-hgm |
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hgm_x.yz.tar.gz |
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[cran submit package] search ==> http://cran.r-project.org/submit.html |
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| * Notes. |
* Notes. |
| library.dynam() shows a list of shared libraries loaded. |
library.dynam() shows a list of shared libraries loaded. |
| dyn.load("hgm.so") can be used to load shared library by hand. |
dyn.load("hgm.so") can be used to load shared library by hand. |
| Line 95 http://kbroman.org/pkg_primer/pages/cran.html |
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| Line 114 http://kbroman.org/pkg_primer/pages/cran.html |
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| R CMD check hgm --as-cran |
R CMD check hgm --as-cran |
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;; |
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2020.02.06 Installing r-devel |
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apt-get install subversion ccache |
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apt-get install xorg-dev |
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apt-get install libcurl4-openssl-dev |
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apt install libpcre2-dev (2022.04.06 this22/R orange3m) |
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pushd ~/this19/R (for example) |
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svn co https://svn.r-project.org/R/trunk r-devel/R |
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cd r-devel/R and follow the INSTALL |
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./configure --without-recommended-packages --prefix ~/this19/R |
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make |
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export PATH=~/this19/R/r-devel/R/bin:$PATH |
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--> export PATH=~/this22/R/r-devel/R/bin:$PATH on orange3m (2022.04.06) |
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Valgrid can be used by |
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valgrind ./a.out |
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A sample: main() { int n; if (n>0) n=0; } |
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