OpenXM/src/R/r-packages/note.txt - diff

Return to note.txt CVS log

Up to [local] / OpenXM / src / R / r-packages

version 1.6, 2016/02/15 07:42:07

version 1.9, 2017/03/22 00:42:56

Line 1

$OpenXM: OpenXM/src/R/r-packages/note.txt,v 1.5 2015/04/05 23:47:46 takayama Exp $

$OpenXM: OpenXM/src/R/r-packages/note.txt,v 1.8 2016/10/30 01:10:18 takayama Exp $

See also OpenXM/src/hgm/note.txt

Line 28 See also OpenXM/src/hgm/note.txt

R CMD INSTALL hgm

library(hgm)

You can check hgm.so3nc by hand.

You can check hgm.ncso3 by hand.

R CMD REMOVE hgm

It is used to remove the test library.

Line 39 See also OpenXM/src/hgm/note.txt

R CMD build --binary hgm (perhaps, obsolete style)

(5) make copy-web-hgm

hgm_x.yz.tar.gz

[cran submit package] search ==> http://cran.r-project.org/submit.html

* Notes.

library.dynam() shows a list of shared libraries loaded.

dyn.load("hgm.so") can be used to load shared library by hand.

Line 63 cat >>~/.valgrindrc

Line 67 cat >>~/.valgrindrc

--track-origins=yes

ctrl-D

make clean

R CMD check hgm --use-valgrind

more hgm.Rcheck/hgm-Ex.Rout

Example of an error (Note that there is no error message in *.log)

Line 88 c<-hgm.p2wishart(m=4,n1=50,n2=100,beta=c(1,2,4,8),q0=0

Line 93 c<-hgm.p2wishart(m=4,n1=50,n2=100,beta=c(1,2,4,8),q0=0

output is correct.

c<-hgm.p2wishart(m=4,n1=50,n2=100,beta=c(1,2,4,8),q0=0.5,q=30,err=c(1e-30,1e-10),autoplot=1)

crashed, but by commented out todo in mh.c, it works. See @s/2016/02

;;

R CMD check hgm --as-cran