OpenXM/src/R/r-packages/note.txt - diff

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version 1.7, 2016/10/28 02:27:39

version 1.10, 2019/11/16 11:03:43

Line 1

$OpenXM: OpenXM/src/R/r-packages/note.txt,v 1.6 2016/02/15 07:42:07 takayama Exp $

$OpenXM: OpenXM/src/R/r-packages/note.txt,v 1.9 2017/03/22 00:42:56 takayama Exp $

See also OpenXM/src/hgm/note.txt

* R package build, reference pages.

* Example

Edit files in src/hgm

cd R/r-packages

make rsync

R CMD INSTALL hgm

Start R and library(hgm)

hgm.ncso3()

* C source codes.

C sources and headers should be developed and edited in the directory

OpenXM/src/hgm in order to provide a standalone mode without R

Line 28 See also OpenXM/src/hgm/note.txt

Line 38 See also OpenXM/src/hgm/note.txt

R CMD INSTALL hgm

library(hgm)

You can check hgm.so3nc by hand.

You can check hgm.ncso3 by hand.

R CMD REMOVE hgm

It is used to remove the test library.

Line 39 See also OpenXM/src/hgm/note.txt

Line 49 See also OpenXM/src/hgm/note.txt

R CMD build --binary hgm (perhaps, obsolete style)

(5) make copy-web-hgm

hgm_x.yz.tar.gz

[cran submit package] search ==> http://cran.r-project.org/submit.html

* Notes.

library.dynam() shows a list of shared libraries loaded.

dyn.load("hgm.so") can be used to load shared library by hand.

Line 89 c<-hgm.p2wishart(m=4,n1=50,n2=100,beta=c(1,2,4,8),q0=0

Line 103 c<-hgm.p2wishart(m=4,n1=50,n2=100,beta=c(1,2,4,8),q0=0

output is correct.

c<-hgm.p2wishart(m=4,n1=50,n2=100,beta=c(1,2,4,8),q0=0.5,q=30,err=c(1e-30,1e-10),autoplot=1)

crashed, but by commented out todo in mh.c, it works. See @s/2016/02

;;

R CMD check hgm --as-cran