version 1.10, 2002/01/04 06:06:09 |
version 1.11, 2002/02/25 01:02:14 |
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% $OpenXM: OpenXM/doc/Papers/dag-noro-proc.tex,v 1.9 2001/12/28 06:06:15 noro Exp $ |
% $OpenXM: OpenXM/doc/Papers/dag-noro-proc.tex,v 1.10 2002/01/04 06:06:09 noro Exp $ |
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\usepackage{epsfig} |
\usepackage{epsfig} |
\def\cont{{\rm cont}} |
\def\cont{{\rm cont}} |
\def\GCD{{\rm GCD}} |
\def\GCD{{\rm GCD}} |
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\def\Q{{\bf Q}} |
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\maketitle % typesets the title of the contribution |
\maketitle % typesets the title of the contribution |
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\begin{abstract} |
%\begin{abstract} |
Risa/Asir is software for polynomial computation. It has been |
%Risa/Asir is software for polynomial computation. It has been |
developed for testing experimental polynomial algorithms, and now it |
%developed for testing experimental polynomial algorithms, and now it |
acts also as a main component in the OpenXM package \cite{OPENXM}. |
%acts also as a main component in the OpenXM package \cite{noro:OPENXM}. |
OpenXM is an infrastructure for exchanging mathematical |
%OpenXM is an infrastructure for exchanging mathematical |
data. It defines a client-server architecture for parallel and |
%data. It defines a client-server architecture for parallel and |
distributed computation. In this article we present an overview of |
%distributed computation. In this article we present an overview of |
Risa/Asir and review several techniques for improving performances of |
%Risa/Asir and review several techniques for improving performances of |
Groebner basis computation over {\bf Q}. We also show Risa/Asir's |
%Groebner basis computation over {\bf Q}. We also show Risa/Asir's |
OpenXM interfaces and their usages. |
%OpenXM interfaces and their usages. |
\end{abstract} |
%\end{abstract} |
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\section{A computer algebra system Risa/Asir} |
\section{Introduction} |
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\subsection{What is Risa/Asir?} |
%Risa/Asir $B$O(B, $B?t(B, $BB?9`<0$J$I$KBP$9$k1i;;$r<BAu$9$k(B engine, |
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%$B%f!<%68@8l$r<BAu$9$k(B parser and interpreter $B$*$h$S(B, |
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%$BB>$N(B application $B$H$N(B interaction $B$N$?$a$N(B OpenXM interface $B$+$i$J$k(B |
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%computer algebra system $B$G$"$k(B. |
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Risa/Asir is a computer algebra system which consists of an engine for |
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operations on numbers and polynomials, a parser and an interpreter for |
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the user language, and a communication interface called OpenXM API for |
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interaction with other applications. |
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%engine $B$G$O(B, $B?t(B, $BB?9`<0$J$I$N(B arithmetics $B$*$h$S(B, $BB?9`<0(B |
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%GCD, $B0x?tJ,2r(B, $B%0%l%V%J4pDl7W;;$,<BAu$5$l$F$$$k(B. $B$3$l$i$OAH$_9~$_4X?t(B |
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%$B$H$7$F%f!<%68@8l$+$i8F$S=P$5$l$k(B. |
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The engine implements fundamental arithmetics on numbers and polynomials, |
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polynomial GCD, polynomial factorizations and Groebner basis computations, |
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etc. These can be called from the user language as builtin functions. |
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%Risa/Asir $B$N%f!<%68@8l$O(B C $B8@8l(B like $B$JJ8K!$r$b$A(B, $BJQ?t$N7?@k8@$,(B |
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%$B$J$$(B, $B%j%9%H=hM}$*$h$S<+F0(B garbage collection $B$D$-$N%$%s%?%W%j%?(B |
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%$B8@8l$G$"$k(B. $B%f!<%68@8l%W%m%0%i%`$O(B parser $B$K$h$jCf4V8@8l$K(B |
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%$BJQ49$5$l(B, interpreter $B$K$h$j2r<a<B9T$5$l$k(B. interpreter $B$K$O(B |
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%gdb $BIw$N(B debugger $B$,AH$_9~$^$l$F$$$k(B. |
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The user language has C-like syntax, without type declarations |
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of variables, with list processing and with automatic garbage collection. |
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The interpreter is equipped with a {\tt gdb}-like debugger. |
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%$B$3$l$i$N5!G=$O(B OpenXM interface $B$rDL$7$FB>$N(B application $B$+$i$b;HMQ2D(B |
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%$BG=$G$"$k(B. OpenXM \cite{noro:RFC100} $B$O?t3X%=%U%H%&%'%"$N(B client-server |
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%$B7?$NAj8_8F$S=P$7$N$?$a$N(B $B%W%m%H%3%k$G$"$k(B. |
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These functions can be called from other applications via OpenXM API. |
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OpenXM \cite{noro:RFC100} is a protocol for client-server |
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communications between mathematical software. We are distributing |
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OpenXM package \cite{noro:OPENXM}, which is a collection of various |
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clients and servers comlient to the OpenXM protocol specification. |
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Risa/Asir \cite{RISA} is software mainly for polynomial |
%Risa/Asir $B$OB?9`<00x?tJ,2r(B, $B%,%m%"727W;;(B \cite{noro:ANY}, $B%0%l%V%J4pDl(B |
computation. Its major functions are polynomial factorization and |
%$B7W;;(B \cite{noro:NM,noro:NY}, $B=`AG%$%G%"%kJ,2r(B \cite{noro:SY}, $B0E9f(B |
Groebner basis computation, whose core parts are implemented as |
%\cite{noro:IKNY} $B$K$*$1$k<B83E*%"%k%4%j%:%`(B $B$r%F%9%H$9$k$?$a$N%W%i%C%H(B |
built-in functions. Some higher algorithms such as primary ideal |
%$B%U%)!<%`$H$7$F3+H/$5$l$F$-$?(B. $B$^$?(B, OpenXM API $B$rMQ$$$F(B parallel |
decomposition or Galois group computation are built on them by the |
%distributed computation $B$N<B83$K$bMQ$$$i$l$F$$$k(B. $B:,44$r$J$9$N$OB?9`(B |
user language called Asir language. Asir language can be regarded as C |
%$B<00x?tJ,2r$*$h$S%0%l%V%J4pDl7W;;$G$"$k(B. $BK\9F$G$O(B, $BFC$K(B, $B%0%l%V%J4pDl(B |
language without type declaration of variables, with list processing, |
%$B7W;;$K4X$7$F(B, $B$=$N4pK\$*$h$S(B {\bf Q} $B>e$G$N7W;;$N:$Fq$r9nI~$9$k$?$a$N(B |
and with automatic garbage collection. A built-in {\tt gdb}-like user |
%$B$5$^$6$^$J9)IW$*$h$S$=$N8z2L$K$D$$$F=R$Y$k(B. $B$^$?(B, Risa/Asir $B$O(B OpenXM |
language debugger is available. Risa/Asir is open source and the |
%package $B$K$*$1$k<gMW$J(B component $B$N0l$D$G$"$k(B. Risa/Asir $B$r(B client $B$"(B |
source code and binaries are available via {\tt ftp} or {\tt CVS}. |
%$B$k$$$O(B server $B$H$7$FMQ$$$kJ,;6JBNs7W;;$K$D$$$F(B, $B<BNc$r$b$H$K2r@b$9$k(B. |
Risa/Asir is not only a standalone computer algebra system but also a |
Risa/Asir has been used for implementing and testing experimental |
main component in OpenXM package \cite{OPENXM}, which is a collection |
algorithms such as polynomial factorizations, splitting field and |
of various software compliant to OpenXM protocol specification. |
Galois group computations \cite{noro:ANY}, Groebner basis computations |
OpenXM is an infrastructure for exchanging mathematical data and |
\cite{noro:REPL,noro:NOYO} primary ideal decomposition \cite{noro:SY} |
Risa/Asir has three kinds of OpenXM interfaces : |
and cryptgraphy \cite{noro:IKNY}. In these applications the important |
OpenXM API in the Risa/Asir user language, |
funtions are polynomial factorization and Groebner basis |
OpenXM C language API in the Risa/Asir subroutine library, |
computation. We focus on Groebner basis computation and we review its |
and an OpenXM server. |
fundamentals and vaious efforts for improving efficiency especially |
Our goals of developing Risa/Asir are as follows: |
over $\Q$. Risa/Asir is also a main component of OpenXM package and |
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it has been used for parallel distributed computation with OpenXM API. |
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We will explain how one can execute parallel distributed computation |
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by using Risa/Asir as a client or a server. |
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\begin{enumerate} |
\section{Efficient Groebner basis computation over {\bf Q}} |
\item Providing a platform for testing new algorithms |
\label{tab:gbtech} |
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Risa/Asir has been a platform for testing experimental algorithms in |
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polynomial factorization, Groebner basis computation, |
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cryptography and quantifier elimination. As to Groebner basis, we have |
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been mainly interested in problems over {\bf Q} and we tried applying |
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various modular techniques to overcome difficulties caused by huge |
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intermediate coefficients. We have had several results and they have |
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been implemented in Risa/Asir with other known methods. |
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\item General purpose open system |
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We need a lot of functions to make Risa/Asir a general purpose |
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computer algebra system. In recent years we can make use of various high |
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performance applications or libraries as free software. We wrapped |
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such software as OpenXM servers and we started to release a collection |
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of such servers and clients as the OpenXM package in 1997. Risa/Asir |
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is now a main client in the package. |
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\item Environment for parallel and distributed computation |
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The ancestor of OpenXM is a protocol designed for doing parallel |
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distributed computations by connecting multiple Risa/Asir's over |
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TCP/IP. OpenXM is also designed to provide an environment for |
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efficient parallel distributed computation. Currently only |
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client-server communication is available, but we are preparing a |
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specification OpenXM-RFC 102 allowing client-client communication, |
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which will enable us to execute wider range of parallel algorithms |
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requiring collective operations efficiently. |
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\end{enumerate} |
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\subsection{Groebner basis and the related computation} |
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Currently Risa/Asir can only deal with polynomial ring. Operations on |
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modules over polynomial rings have not yet supported. However, both |
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commutative polynomial rings and Weyl algebra are supported and one |
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can compute Groebner basis in both rings over {\bf Q}, fields of |
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rational functions and finite fields. In the early stage of our |
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development, our effort was mainly devoted to improve the efficiency |
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of computation over {\bf Q}. Our main tool is modular |
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computation. For Buchberger algorithm we adopted the trace lifting |
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algorithm by Traverso \cite{TRAV} and elaborated it by applying our |
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theory on a correspondence between Groebner basis and its modular |
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image \cite{NOYO}. We also combine the trace lifting with |
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homogenization to stabilize selection strategies, which enables us to |
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compute several examples efficiently which are hard to compute without |
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such a combination. Our modular method can be applied to the change |
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of ordering algorithm\cite{FGLM} and rational univariate |
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representation \cite{RUR}. We also made a test implementation of |
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$F_4$ algorithm \cite{F4}. In the later section we will show timing |
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data on Groebner basis computation. |
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\subsection{Polynomial factorization} |
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Here we briefly review functions on polynomial factorization. For |
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univariate factorization over {\bf Q}, the Berlekamp-Zassenhaus |
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algorithm is implemented. Efficient algorithms recently proposed have |
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not yet implemented. For univariate factorization over algebraic |
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number fields, Trager's algorithm \cite{TRAGER} is implemented with |
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some modifications. Its major applications are splitting field and |
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Galois group computation of polynomials over {\bf Q} \cite{ANY}. For |
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such purpose a tower of simple extensions are suitable because factors |
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represented over a simple extension often have huge coefficients. For |
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univariate factorization over finite fields, equal degree |
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factorization and Cantor-Zassenhaus algorithm are implemented. We can |
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use various representation of finite fields: $GF(p)$ with a machine |
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integer prime $p$, $GF(p)$ and $GF(p^n)$ with any odd prime $p$, |
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$GF(2^n)$ with a bit-array representation of polynomials over $GF(2)$ |
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and $GF(p^n)$ with small $p^n$ represented by a primitive root. For |
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multivariate factorization over {\bf Q}, the EZ(Extended Zassenhaus) |
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type algorithm is implemented. |
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\subsection{Other functions} |
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By applying Groebner basis computation and polynomial factorization, |
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we have implemented several higher level algorithms. A typical |
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application is primary ideal decomposition of polynomial ideals over |
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{\bf Q}, which needs both functions. Shimoyama-Yokoyama algorithm |
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\cite{SY} for primary decomposition is written in the user language. |
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Splitting field and Galois group computation \cite{ANY} are closely |
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related and are also important applications of polynomial |
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factorization. |
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\section{Techniques for efficient Groebner basis computation over {\bf Q}} |
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\label{gbtech} |
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In this section we review several practical techniques to improve |
In this section we review several practical techniques to improve |
Groebner basis computation over {\bf Q}, which are easily |
Groebner basis computation over {\bf Q}, which are easily |
implemented but may not be well known. |
implemented but may not be well known. |
Line 261 it practical. The following are major improvements: |
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Line 211 it practical. The following are major improvements: |
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\item Useless pair detection |
\item Useless pair detection |
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We don't have to process all the pairs in $D$ and several useful |
We don't have to process all the pairs in $D$ and several useful |
criteria for detecting useless pairs were proposed. |
criteria for detecting useless pairs were proposed (cf. \cite{noro:BW}). |
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\item Selection strategy |
\item Selection strategy |
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The selection of $\{f,g\}$ greatly affects the subsequent computation. |
The selection of $\{f,g\}$ greatly affects the subsequent computation. |
The typical strategies are the normal startegy and the sugar strategy. |
The typical strategies are the normal startegy \cite{noro:BUCH} |
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and the sugar strategy \cite{noro:SUGAR}. |
The latter was proposed for efficient computation under a non |
The latter was proposed for efficient computation under a non |
degree-compatible order. |
degree-compatible order. |
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Line 274 degree-compatible order. |
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Line 225 degree-compatible order. |
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Even if we apply several criteria, it is difficult to detect all pairs |
Even if we apply several criteria, it is difficult to detect all pairs |
whose S-polynomials are reduced to zero, and the cost to process them |
whose S-polynomials are reduced to zero, and the cost to process them |
often occupies a major part in the whole computation. The trace algorithms |
often occupies a major part in the whole computation. The trace |
were proposed to reduce such cost. This will be explained in more detail |
algorithms \cite{noro:TRAV} were proposed to reduce such cost. This |
in Section \ref{gbhomo}. |
will be explained in more detail in Section \ref{sec:gbhomo}. |
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\item Change of ordering |
\item Change of ordering |
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For elimination, we need a Groebner basis with respect to a non |
For elimination, we need a Groebner basis with respect to a non |
degree-compatible order, but it is often hard to compute it by |
degree-compatible order, but it is often hard to compute it by the |
the Buchberger algorithm. If the ideal is zero dimensional, we |
Buchberger algorithm. If the ideal is zero dimensional, we can apply a |
can apply a change of ordering algorithm for a Groebner basis |
change of ordering algorithm \cite{noro:FGLM} for a Groebner basis |
with respect to any order and we can obtain a Groebner basis |
with respect to any order and we can obtain a Groebner basis with |
with respect to a desired order. |
respect to a desired order. |
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\end{itemize} |
\end{itemize} |
By implementing these techniques, one can obtain Groebner bases for |
By implementing these techniques, one can obtain Groebner bases for |
Line 294 problems with these classical tools. In the subsequent |
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Line 245 problems with these classical tools. In the subsequent |
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we show several methods for further improvements. |
we show several methods for further improvements. |
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\subsection{Combination of homogenization and trace lifting} |
\subsection{Combination of homogenization and trace lifting} |
\label{gbhomo} |
\label{sec:gbhomo} |
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Traverso's trace lifting algorithm can be |
The trace lifting algorithm can be |
formulated in an abstract form as follows (c.f. \cite{FPARA}). |
formulated in an abstract form as follows (c.f. \cite{noro:FPARA}). |
\begin{tabbing} |
\begin{tabbing} |
Input : a finite subset $F \subset {\bf Z}[X]$\\ |
Input : a finite subset $F \subset {\bf Z}[X]$\\ |
Output : a Groebner basis $G$ of $Id(F)$ with respect to a term order $<$\\ |
Output : a Groebner basis $G$ of $Id(F)$ with respect to a term order $<$\\ |
Line 336 lots of redundant elements can be removed. |
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Line 287 lots of redundant elements can be removed. |
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Let $I$ be a zero-dimensional ideal in $R={\bf Q}[x_1,\ldots,x_n]$. |
Let $I$ be a zero-dimensional ideal in $R={\bf Q}[x_1,\ldots,x_n]$. |
Then the minimal polynomial $m(x_i)$ of a variable $x_i$ in $R/I$ can |
Then the minimal polynomial $m(x_i)$ of a variable $x_i$ in $R/I$ can |
be computed by a partial FGLM \cite{FGLM}, but it often takes long |
be computed by a partial FGLM \cite{noro:FGLM}, but it often takes long |
time if one searches $m(x_i)$ incrementally over {\bf Q}. In this |
time if one searches $m(x_i)$ incrementally over {\bf Q}. In this |
case we can apply a simple modular method to compute the minimal |
case we can apply a simple modular method to compute the minimal |
polynomial. |
polynomial. |
Line 355 $GF(p)$ because $\phi_p(G)$ is a Groebner basis. Once |
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Line 306 $GF(p)$ because $\phi_p(G)$ is a Groebner basis. Once |
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candidate of $\deg(m(x_i))$, $m(x_i)$ can be determined by solving a |
candidate of $\deg(m(x_i))$, $m(x_i)$ can be determined by solving a |
system of linear equations via the method of indeterminate |
system of linear equations via the method of indeterminate |
coefficient, and it can be solved efficiently by $p$-adic method. |
coefficient, and it can be solved efficiently by $p$-adic method. |
Arguments on \cite{NOYO} ensures that $m(x_i)$ is what we want if it |
Arguments on \cite{noro:NOYO} ensures that $m(x_i)$ is what we want if it |
exists. Note that the full FGLM can also be computed by the same |
exists. Note that the full FGLM can also be computed by the same |
method. |
method. |
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\subsection{Integer contents reduction} |
\subsection{Integer contents reduction} |
\label{gbcont} |
\label{sec:gbcont} |
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In some cases the cost to remove integer contents during normal form |
In some cases the cost to remove integer contents during normal form |
computations is dominant. We can remove the content of an integral |
computations is dominant. We can remove the content of an integral |
polynomial $f$ efficiently by the following method \cite{REPL}. |
polynomial $f$ efficiently by the following method \cite{noro:REPL}. |
\begin{tabbing} |
\begin{tabbing} |
Input : an integral polynomial $f$\\ |
Input : an integral polynomial $f$\\ |
Output : a pair $(\cont(f),f/\cont(f))$\\ |
Output : a pair $(\cont(f),f/\cont(f))$\\ |
Line 386 $g_0$ with high accuracy. Then other components are ea |
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Line 337 $g_0$ with high accuracy. Then other components are ea |
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%cost for reading basis elements from disk is often negligible because |
%cost for reading basis elements from disk is often negligible because |
%of the cost for coefficient computations. |
%of the cost for coefficient computations. |
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\section{Risa/Asir performance} |
\subsection{Performances of Groebner basis computation} |
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We show timing data on Risa/Asir for Groebner basis computation |
We show timing data on Risa/Asir for Groebner basis computation. The |
and polynomial factorization. The measurements were made on |
measurements were made on a PC with PentiumIII 1GHz and 1Gbyte of main |
a PC with PentiumIII 1GHz and 1Gbyte of main memory. Timings |
memory. Timings are given in seconds. In the tables `---' means it was |
are given in seconds. In the tables `---' means it was not |
not measured. $C_n$ is the cyclic $n$ system and $K_n$ is the Katsura |
measured. |
$n$ system, both are famous bench mark problems \cite{noro:BENCH}. $McKay$ |
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\cite{noro:REPL} is a system whose Groebner basis is hard to compute over |
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{\bf Q}. In Risa/Asir we have a test implemention of $F_4$ algorithm |
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\cite{noro:F4} and we also show its current performance. The term order is |
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graded reverse lexicographic order. |
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\subsection{Groebner basis computation} |
Table \ref{tab:gbmod} shows timing data for Groebner basis computation |
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over $GF(32003)$. $F_4$ implementation in Risa/Asir outperforms |
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Buchberger algorithm implementation, but it is still several times |
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slower than $F_4$ implementation in FGb \cite{noro:FGB}. |
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Table \ref{gbmod} and Table \ref{gbq} show timing data for Groebner |
Table \ref{tab:gbq} shows timing data for Groebner basis computation over |
basis computation over $GF(32003)$ and over {\bf Q} respectively. In |
$\Q$, where we compare the timing data under various configuration of |
Table \ref{gbq} we compare the timing data under various configuration |
algorithms. {\bf TR}, {\bf Homo}, {\bf Cont} means trace lifting, |
of algorithms: with/without trace lifting, homogenization and contents |
homogenization and contents reduction respectively. |
reduction. |
\ref{tab:gbq} also shows timings of minimal polynomial |
$C_n$ is the cyclic $n$ system and $K_n$ is the Katsura $n$ system, |
computation for zero-dimensional ideals. Table \ref{tab:gbq} shows that |
both are famous bench mark problems \cite{BENCH}. We also measured |
it is difficult or practically impossible to compute Groebner bases of |
the timing for $McKay$ system over {\bf Q} \cite{REPL}. the term |
$C_7$, $C_8$ and $McKay$ without the methods described in Section |
order is graded reverse lexicographic order. |
\ref{sec:gbhomo} and \ref{sec:gbcont}. |
As to the Buchberger algorithm over $GF(32003)$, |
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Singular\cite{SINGULAR}'s Buchberger algorithm implementation shows |
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better performance than Risa/Asir. $F_4$ implementation in Risa/Asir |
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is outperforms both of them, but it is still several times slower than |
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$F_4$ implementation in FGb \cite{FGB}. |
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Table \ref{gbq} shows that it is difficult or practically impossible |
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to compute Groebner bases of $C_7$, $C_8$ and $McKay$ without |
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the methods described in Section \ref{gbhomo} and \ref{gbcont}. |
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Though $F_4$ implementation in Risa/Asir over {\bf Q} is still |
Though $F_4$ implementation in Risa/Asir over {\bf Q} is still |
experimental, the timing of $McKay$ is greatly reduced. |
experimental, the timing of $McKay$ is greatly reduced. |
Fig. \ref{f4vsbuch} explains why $F_4$ is efficient in this case. The |
Fig. \ref{tab:f4vsbuch} explains why $F_4$ is efficient in this case. The |
figure shows that the Buchberger algorithm produces normal forms with |
figure shows that the Buchberger algorithm produces normal forms with |
huge coefficients for S-polynomials after the 250-th one, which are |
huge coefficients for S-polynomials after the 250-th one, which are |
the computations in degree 16. However, we know that the reduced |
the computations in degree 16. However, we know that the reduced |
Line 437 FGb(estimated) & 0.9 & 23 & 0.1 & 0.8 & 6 & 51 & 366 \ |
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Line 385 FGb(estimated) & 0.9 & 23 & 0.1 & 0.8 & 6 & 51 & 366 \ |
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\end{tabular} |
\end{tabular} |
\end{center} |
\end{center} |
\caption{Groebner basis computation over $GF(32003)$} |
\caption{Groebner basis computation over $GF(32003)$} |
\label{gbmod} |
\label{tab:gbmod} |
\end{table} |
\end{table} |
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\begin{table}[hbtp] |
\begin{table}[hbtp] |
\begin{center} |
\begin{center} |
\begin{tabular}{|c||c|c|c|c|c|} \hline |
\begin{tabular}{|c||c|c|c|c|c|} \hline |
& $C_7$ & $C_8$ & $K_7$ & $K_8$ & $McKay$ \\ \hline |
& $C_7$ & $C_8$ & $K_7$ & $K_8$ & $McKay$ \\ \hline |
TR+Homo,Cont & 389 & 54000 & 29 & 299 & 34950 \\ \hline |
TR+Homo+Cont & 389 & 54000 & 29 & 299 & 34950 \\ \hline |
TR+Homo & --- & --- & --- & --- & --- \\ \hline |
TR+Homo & --- & --- & --- & --- & --- \\ \hline |
TR & --- & --- & --- & --- & --- \\ \hline |
TR & --- & --- & --- & --- & --- \\ \hline \hline |
|
Minipoly & --- & --- & --- & --- & N/A \\ \hline |
%Singular & --- & 15247 & --- & 7.6 & 79 & $>$ 20h \\ \hline |
%Singular & --- & 15247 & --- & 7.6 & 79 & $>$ 20h \\ \hline |
%CoCoA 4 & --- & 13227 & --- & 57 & 709 & --- \\ \hline\hline |
%CoCoA 4 & --- & 13227 & --- & 57 & 709 & --- \\ \hline\hline |
%Asir $F_4$ & 989 & 456 & --- & 90 & 991 & 4939 \\ \hline |
%Asir $F_4$ & 989 & 456 & --- & 90 & 991 & 4939 \\ \hline |
%FGb(estimated) & 8 &11 & 288 & 0.6 & 5 & 10 \\ \hline |
%FGb(estimated) & 8 &11 & 288 & 0.6 & 5 & 10 \\ \hline |
\end{tabular} |
\end{tabular} |
|
|
(TR : trace lifting; Homo : homogenization; Cont : contents reduction) |
|
\end{center} |
\end{center} |
\caption{Groebner basis computation over {\bf Q}} |
\caption{Groebner basis and minimal polynomial computation over {\bf Q}} |
\label{gbq} |
\label{tab:gbq} |
\end{table} |
\end{table} |
|
|
\begin{figure}[hbtp] |
\begin{figure}[hbtp] |
Line 466 TR & --- & --- & --- & --- & --- \\ \hline |
|
Line 412 TR & --- & --- & --- & --- & --- \\ \hline |
|
\epsffile{blen.ps} |
\epsffile{blen.ps} |
\end{center} |
\end{center} |
\caption{Maximal coefficient bit length of intermediate bases} |
\caption{Maximal coefficient bit length of intermediate bases} |
\label{f4vsbuch} |
\label{tab:f4vsbuch} |
\end{figure} |
\end{figure} |
|
|
Table \ref{minipoly} shows timing data for the minimal polynomial |
%Table \ref{minipoly} shows timing data for the minimal polynomial |
computations of all variables over {\bf Q} by the modular method. |
%computations of all variables over {\bf Q} by the modular method. |
\begin{table}[hbtp] |
%\begin{table}[hbtp] |
\begin{center} |
%\begin{center} |
\begin{tabular}{|c||c|c|c|c|c|} \hline |
%\begin{tabular}{|c||c|c|c|c|c|} \hline |
& $C_6$ & $C_7$ & $K_6$ & $K_7$ & $K_8$ \\ \hline |
% & $C_6$ & $C_7$ & $K_6$ & $K_7$ & $K_8$ \\ \hline |
%Singular & 0.9 & 846 & 307 & 60880 & --- \\ \hline |
%Singular & 0.9 & 846 & 307 & 60880 & --- \\ \hline |
Asir & 1.5 & 182 & 12 & 164 & 3420 \\ \hline |
%Asir & 1.5 & 182 & 12 & 164 & 3420 \\ \hline |
\end{tabular} |
%\end{tabular} |
\end{center} |
%\end{center} |
\caption{Minimal polynomial computation} |
%\caption{Minimal polynomial computation} |
\label{minipoly} |
%\label{minipoly} |
\end{table} |
%\end{table} |
|
|
\subsection{Polynomial factorization} |
%\subsection{Polynomial factorization} |
|
% |
%Table \ref{unifac} shows timing data for univariate factorization over |
%Table \ref{unifac} shows timing data for univariate factorization over |
%{\bf Q}. $N_{i,j}$ is an irreducible polynomial which are hard to |
%{\bf Q}. $N_{i,j}$ is an irreducible polynomial which are hard to |
%factor by the classical algorithm. $N_{i,j}$ is a norm of a polynomial |
%factor by the classical algorithm. $N_{i,j}$ is a norm of a polynomial |
%and $\deg(N_i) = i$ with $j$ modular factors. Risa/Asir is |
%and $\deg(N_i) = i$ with $j$ modular factors. Risa/Asir is |
%disadvantageous in factoring polynomials of this type because the |
%disadvantageous in factoring polynomials of this type because the |
%algorithm used in Risa/Asir has exponential complexity. In contrast, |
%algorithm used in Risa/Asir has exponential complexity. In contrast, |
%CoCoA 4\cite{COCOA} and NTL-5.2\cite{NTL} show nice performances |
%CoCoA 4\cite{noro:COCOA} and NTL-5.2\cite{noro:NTL} show nice performances |
%because they implement recently developed algorithms. |
%because they implement recently developed algorithms. |
% |
% |
%\begin{table}[hbtp] |
%\begin{table}[hbtp] |
Line 508 Asir & 1.5 & 182 & 12 & 164 & 3420 \\ \hline |
|
Line 454 Asir & 1.5 & 182 & 12 & 164 & 3420 \\ \hline |
|
%\caption{Univariate factorization over {\bf Q}} |
%\caption{Univariate factorization over {\bf Q}} |
%\label{unifac} |
%\label{unifac} |
%\end{table} |
%\end{table} |
|
% |
Table \ref{multifac} shows timing data for multivariate factorization |
%Table \ref{multifac} shows timing data for multivariate factorization |
over {\bf Q}. $W_{i,j,k}$ is a product of three multivariate |
%over {\bf Q}. $W_{i,j,k}$ is a product of three multivariate |
polynomials $Wang[i]$, $Wang[j]$, $Wang[k]$ given in a data file {\tt |
%polynomials $Wang[i]$, $Wang[j]$, $Wang[k]$ given in a data file {\tt |
fctrdata} in Asir library directory. It is also included in Risa/Asir |
%fctrdata} in Asir library directory. It is also included in Risa/Asir |
source tree and located in {\tt asir2000/lib}. These examples have |
%source tree and located in {\tt asir2000/lib}. These examples have |
leading coefficients of large degree which vanish at 0 which tend to |
%leading coefficients of large degree which vanish at 0 which tend to |
cause so-called the leading coefficient problem the bad zero |
%cause so-called the leading coefficient problem the bad zero |
problem. Risa/Asir's implementation carefully treats such cases and it |
%problem. Risa/Asir's implementation carefully treats such cases and it |
shows reasonable performance compared with other famous systems. |
%shows reasonable performance compared with other famous systems. |
\begin{table}[hbtp] |
%\begin{table}[hbtp] |
\begin{center} |
%\begin{center} |
\begin{tabular}{|c||c|c|c|c|c|} \hline |
%\begin{tabular}{|c||c|c|c|c|c|} \hline |
& $W_{1,2,3}$ & $W_{4,5,6}$ & $W_{7,8,9}$ & $W_{10,11,12}$ & $W_{13,14,15}$ \\ \hline |
% & $W_{1,2,3}$ & $W_{4,5,6}$ & $W_{7,8,9}$ & $W_{10,11,12}$ & $W_{13,14,15}$ \\ \hline |
variables & 3 & 5 & 5 & 5 & 4 \\ \hline |
%variables & 3 & 5 & 5 & 5 & 4 \\ \hline |
monomials & 905 & 41369 & 51940 & 30988 & 3344 \\ \hline\hline |
%monomials & 905 & 41369 & 51940 & 30988 & 3344 \\ \hline\hline |
Asir & 0.2 & 4.7 & 14 & 17 & 0.4 \\ \hline |
%Asir & 0.2 & 4.7 & 14 & 17 & 0.4 \\ \hline |
%Singular& $>$15min & --- & ---& ---& ---\\ \hline |
%Singular& $>$15min & --- & ---& ---& ---\\ \hline |
%CoCoA 4 & 5.2 & $>$15min & $>$15min & $>$15min & 117 \\ \hline\hline |
%CoCoA 4 & 5.2 & $>$15min & $>$15min & $>$15min & 117 \\ \hline\hline |
Mathematica 4& 0.2 & 16 & 23 & 36 & 1.1 \\ \hline |
%Mathematica 4& 0.2 & 16 & 23 & 36 & 1.1 \\ \hline |
Maple 7& 0.5 & 18 & 967 & 48 & 1.3 \\ \hline |
%Maple 7& 0.5 & 18 & 967 & 48 & 1.3 \\ \hline |
\end{tabular} |
%\end{tabular} |
\end{center} |
%\end{center} |
\caption{Multivariate factorization over {\bf Q}} |
%\caption{Multivariate factorization over {\bf Q}} |
\label{multifac} |
%\label{multifac} |
\end{table} |
%\end{table} |
As to univariate factorization over {\bf Q}, the univariate factorizer |
%As to univariate factorization over {\bf Q}, the univariate factorizer |
implements old algorithms and its behavior is what one expects, |
%implements old algorithms and its behavior is what one expects, |
that is, it shows average performance in cases where there are little |
%that is, it shows average performance in cases where there are little |
extraneous factors, but shows poor performance for hard to factor |
%extraneous factors, but shows poor performance for hard to factor |
polynomials with many extraneous factors. |
%polynomials with many extraneous factors. |
|
|
\section{OpenXM and Risa/Asir OpenXM interfaces} |
\section{OpenXM and Risa/Asir OpenXM interfaces} |
|
|
Line 546 polynomials with many extraneous factors. |
|
Line 492 polynomials with many extraneous factors. |
|
|
|
OpenXM stands for Open message eXchange protocol for Mathematics. |
OpenXM stands for Open message eXchange protocol for Mathematics. |
From the viewpoint of protocol design, it can be regarded as a child |
From the viewpoint of protocol design, it can be regarded as a child |
of OpenMath \cite{OPENMATH}. However our approach is somewhat |
of OpenMath \cite{noro:OPENMATH}. However our approach is somewhat |
different. Our main purpose is to provide an environment for |
different. Our main purpose is to provide an environment for |
integrating {\it existing} mathematical software systems. OpenXM |
integrating {\it existing} mathematical software systems. OpenXM |
RFC-100 \cite{RFC100} defines a client-server architecture. Under |
RFC-100 \cite{noro:RFC100} defines a client-server architecture. Under |
this specification, a client invokes an OpenXM ({\it OX}) server. The |
this specification, a client invokes an OpenXM ({\it OX}) server. The |
client can send OpenXM ({\it OX}) messages to the server. OX messages |
client can send OpenXM ({\it OX}) messages to the server. OX messages |
consist of {\it data} and {\it command}. Data is encoded according to |
consist of {\it data} and {\it command}. Data is encoded according to |
|
|
OpenXM RFC-100 also defines methods for session management. In particular |
OpenXM RFC-100 also defines methods for session management. In particular |
the method to reset a server is carefully designed and it provides |
the method to reset a server is carefully designed and it provides |
a robust way of using servers both for interactive and non-interactive |
a robust way of using servers both for interactive and non-interactive |
purposes. |
purposes. |
|
|
\subsection{OpenXM API in Risa/Asir user language} |
\subsection{OpenXM API in Risa/Asir user language} |
|
|
Line 662 readable form, which may be sufficient for a simple us |
|
Line 608 readable form, which may be sufficient for a simple us |
|
interface. |
interface. |
|
|
\section{Concluding remarks} |
\section{Concluding remarks} |
We have shown the current status of Risa/Asir and its OpenXM |
%We have shown the current status of Risa/Asir and its OpenXM |
interfaces. As a result of our policy of development, it is true that |
%interfaces. As a result of our policy of development, it is true that |
Risa/Asir does not have abundant functions. However it is a completely |
%Risa/Asir does not have abundant functions. However it is a completely |
open system and its total performance is not bad. Especially on |
%open system and its total performance is not bad. Especially on |
Groebner basis computation over {\bf Q}, many techniques for improving |
%Groebner basis computation over {\bf Q}, many techniques for improving |
practical performances have been implemented. As the OpenXM interface |
%practical performances have been implemented. As the OpenXM interface |
specification is completely documented, we can easily add another |
%specification is completely documented, we can easily add another |
function to Risa/Asir by wrapping an existing software system as an OX |
%function to Risa/Asir by wrapping an existing software system as an OX |
server, and other clients can call functions in Risa/Asir by |
%server, and other clients can call functions in Risa/Asir by |
implementing the OpenXM client interface. With the remote debugging |
%implementing the OpenXM client interface. With the remote debugging |
and the function to reset servers, one will be able to enjoy parallel |
%and the function to reset servers, one will be able to enjoy parallel |
and distributed computation with OpenXM facilities. |
%and distributed computation with OpenXM facilities. |
% |
% |
|
We have shown that many techniques for |
|
improving practical performances are implemented in Risa/Asir's |
|
Groebner basis engine. Though another important function, the |
|
polynomial factorizer only implements classical algorithms, its |
|
performance is comparable with or superior to that of Maple or |
|
Mathematica and is still practically useful. By preparing OpenXM |
|
interface or simply linking the Asir OpenXM library, one can call |
|
these efficient functions from any application. Risa/Asir is a |
|
completely open system. It is open source software |
|
and the OpenXM interface specification is completely documented, one |
|
can easily write interfaces to call functions in Risa/Asir and one |
|
will be able to enjoy parallel and distributed computation. |
|
|
|
|
\begin{thebibliography}{7} |
\begin{thebibliography}{7} |
% |
% |
\addcontentsline{toc}{section}{References} |
\addcontentsline{toc}{section}{References} |
|
|
\bibitem{ANY} |
\bibitem{noro:ANY} |
Anay, H., Noro, M., Yokoyama, K. (1996) |
Anay, H., Noro, M., Yokoyama, K. (1996) |
Computation of the Splitting fields and the Galois Groups of Polynomials. |
Computation of the Splitting fields and the Galois Groups of Polynomials. |
Algorithms in Algebraic geometry and Applications, |
Algorithms in Algebraic geometry and Applications, |
Birkh\"auser (Proceedings of MEGA'94), 29--50. |
Birkh\"auser (Proceedings of MEGA'94), 29--50. |
|
|
\bibitem{FPARA} |
\bibitem{noro:FPARA} |
Jean-Charles Faug\`ere (1994) |
Jean-Charles Faug\`ere (1994) |
Parallelization of Groebner basis. |
Parallelization of Groebner basis. |
Proceedings of PASCO'94, 124--132. |
Proceedings of PASCO'94, 124--132. |
|
|
\bibitem{F4} |
\bibitem{noro:F4} |
Jean-Charles Faug\`ere (1999) |
Jean-Charles Faug\`ere (1999) |
A new efficient algorithm for computing Groebner bases ($F_4$). |
A new efficient algorithm for computing Groebner bases ($F_4$). |
Journal of Pure and Applied Algebra (139) 1-3 , 61--88. |
Journal of Pure and Applied Algebra (139) 1-3 , 61--88. |
|
|
\bibitem{FGLM} |
\bibitem{noro:FGLM} |
Faug\`ere, J.-C. et al. (1993) |
Faug\`ere, J.-C. et al. (1993) |
Efficient computation of zero-dimensional Groebner bases by change of ordering. |
Efficient computation of zero-dimensional Groebner bases by change of ordering. |
Journal of Symbolic Computation 16, 329--344. |
Journal of Symbolic Computation 16, 329--344. |
|
|
\bibitem{RFC100} |
\bibitem{noro:RFC100} |
M. Maekawa, et al. (2001) |
M. Maekawa, et al. (2001) |
The Design and Implementation of OpenXM-RFC 100 and 101. |
The Design and Implementation of OpenXM-RFC 100 and 101. |
Proceedings of ASCM2001, World Scientific, 102--111. |
Proceedings of ASCM2001, World Scientific, 102--111. |
|
|
\bibitem{RISA} |
\bibitem{noro:RISA} |
Noro, M. et al. (1994-2001) |
Noro, M. et al. (1994-2001) |
A computer algebra system Risa/Asir. |
A computer algebra system Risa/Asir. |
{\tt http://www.openxm.org}, {\tt http://www.math.kobe-u.ac.jp/Asir/asir.html}. |
{\tt http://www.openxm.org}, {\tt http://www.math.kobe-u.ac.jp/Asir/asir.html}. |
|
|
\bibitem{REPL} |
\bibitem{noro:REPL} |
Noro, M., McKay, J. (1997) |
Noro, M., McKay, J. (1997) |
Computation of replicable functions on Risa/Asir. |
Computation of replicable functions on Risa/Asir. |
Proceedings of PASCO'97, ACM Press, 130--138. |
Proceedings of PASCO'97, ACM Press, 130--138. |
|
|
\bibitem{NOYO} |
\bibitem{noro:NOYO} |
Noro, M., Yokoyama, K. (1999) |
Noro, M., Yokoyama, K. (1999) |
A Modular Method to Compute the Rational Univariate |
A Modular Method to Compute the Rational Univariate |
Representation of Zero-Dimensional Ideals. |
Representation of Zero-Dimensional Ideals. |
Journal of Symbolic Computation, 28, 1, 243--263. |
Journal of Symbolic Computation, 28, 1, 243--263. |
|
|
\bibitem{OPENXM} |
\bibitem{noro:OPENXM} |
OpenXM committers (2000-2001) |
OpenXM committers (2000-2001) |
OpenXM package. |
OpenXM package. |
{\tt http://www.openxm.org}. |
{\tt http://www.openxm.org}. |
|
|
\bibitem{RUR} |
\bibitem{noro:RUR} |
Rouillier, R. (1996) |
Rouillier, R. (1996) |
R\'esolution des syst\`emes z\'ero-dimensionnels. |
R\'esolution des syst\`emes z\'ero-dimensionnels. |
Doctoral Thesis(1996), University of Rennes I, France. |
Doctoral Thesis(1996), University of Rennes I, France. |
|
|
\bibitem{SY} |
\bibitem{noro:SY} |
Shimoyama, T., Yokoyama, K. (1996) |
Shimoyama, T., Yokoyama, K. (1996) |
Localization and Primary Decomposition of Polynomial Ideals. |
Localization and Primary Decomposition of Polynomial Ideals. |
Journal of Symbolic Computation, 22, 3, 247--277. |
Journal of Symbolic Computation, 22, 3, 247--277. |
|
|
\bibitem{TRAGER} |
\bibitem{noro:TRAGER} |
Trager, B.M. (1976) |
Trager, B.M. (1976) |
Algebraic Factoring and Rational Function Integration. |
Algebraic Factoring and Rational Function Integration. |
Proceedings of SYMSAC 76, 219--226. |
Proceedings of SYMSAC 76, 219--226. |
|
|
\bibitem{TRAV} |
\bibitem{noro:TRAV} |
Traverso, C. (1988) |
Traverso, C. (1988) |
Groebner trace algorithms. |
Groebner trace algorithms. |
LNCS {\bf 358} (Proceedings of ISSAC'88), Springer-Verlag, 125--138. |
LNCS {\bf 358} (Proceedings of ISSAC'88), Springer-Verlag, 125--138. |
|
|
\bibitem{BENCH} |
\bibitem{noro:BENCH} |
{\tt http://www.math.uic.edu/\~\,jan/demo.html}. |
{\tt http://www.math.uic.edu/\~\,jan/demo.html}. |
|
|
\bibitem{COCOA} |
\bibitem{noro:COCOA} |
{\tt http://cocoa.dima.unige.it/}. |
{\tt http://cocoa.dima.unige.it/}. |
|
|
\bibitem{FGB} |
\bibitem{noro:FGB} |
{\tt http://www-calfor.lip6.fr/\~\,jcf/}. |
{\tt http://www-calfor.lip6.fr/\~\,jcf/}. |
|
|
%\bibitem{NTL} |
%\bibitem{noro:NTL} |
%{\tt http://www.shoup.net/}. |
%{\tt http://www.shoup.net/}. |
|
|
\bibitem{OPENMATH} |
\bibitem{noro:OPENMATH} |
{\tt http://www.openmath.org/}. |
{\tt http://www.openmath.org/}. |
|
|
\bibitem{SINGULAR} |
\bibitem{noro:SINGULAR} |
{\tt http://www.singular.uni-kl.de/}. |
{\tt http://www.singular.uni-kl.de/}. |
|
|
\end{thebibliography} |
\end{thebibliography} |